Comprehensive Medicinal Plant Database

Genetical descrimination

method Sequencing(direct)
level 種 (species)
result_info Discrimination among Atractylodes japonica, A. macrocephala, A. lancea, and A. chinensis is possible by ITS1 region.
Comments forward TCC GTA GGT GAA CCT GCG G reverse TGC CGA CGA AAC GCC CGC AAG
Related Crude drug data ビャクジュツ
Gene data ATRACTYLODIS RHIZOMA(ITS,AB219405) , ATRACTYLODIS RHIZOMA(ITS1,NIB-0030)
ATRACTYLODIS RHIZOMA(ITS1,NIB-0050) , ATRACTYLODIS RHIZOMA(ITS1,NIB-0103)
ATRACTYLODIS RHIZOMA(ITS1,NIB-0164)
Genetical descrimination results  
Result file ビャクジュツalignment.pdf
Pubmed ID
References 1. Guo, Y., Kondo, K., Terabayashi, S., Yamamoto, Y., Shimada, H., Fujita, M., Kawasaki, T., Maruyama, T., Goda, Y., Mizukami, H. DNA authentication of So-jutsu (Atractylodes lancea rhizome) and Byaku-jutsu (Atractylodes rhizome) obtained in the market based on the nucleotide sequence of the 18S–5.8S rDNA internal transcribed spacer region. J. Nat. Med., 60: 149-156, 2006. 2. Shiba M, Kondou K, Miki M, Yamaji H, Takahashi M, Terabayashi S, Terada S, Sasaki H, Miyamoto K, Aburada M. Identification of medicinal Atractylodes based on ITS sequences of nrDNA. Biol Pharm Bull 29: 215-320, 2006.
Comments Discrimination among Atractylodes japonica, A. macrocephala, A. lancea, and A. chinensis is possible by ITS1 region.